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    IPO5 importin 5 [ Gallus gallus (chicken) ]

    Gene ID: 418783, updated on 17-Aug-2024

    Summary

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    Official Symbol
    IPO5provided by CGNC
    Official Full Name
    importin 5provided by CGNC
    Primary source
    CGNC:50851
    See related
    Ensembl:ENSGALG00010006010
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    RANBP5; RANBP6
    Orthologs
    human mouse all
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    Genomic context

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    See IPO5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (145128584..145166207, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (145120594..145158303, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene FERM, ARH/RhoGEF and pleckstrin domain protein 1 Neighboring gene microRNA 1555 Neighboring gene uncharacterized LOC107051115 Neighboring gene uncharacterized LOC124417668 Neighboring gene RAP2A, member of RAS oncogene family

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear import signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear localization sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    importin-5
    Names
    RAN binding protein 5
    RAN binding protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      145128584..145166207 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_416978.8 → XP_416978.5  importin-5

      UniProtKB/TrEMBL
      A0A8V0XP09
      Related
      ENSGALP00010008443.1, ENSGALT00010014387.1
      Conserved Domains (6) summary
      COG5215
      Location:15 → 636
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      sd00044
      Location:357 → 389
      HEAT; HEAT repeat [structural motif]
      pfam13513
      Location:923 → 968
      HEAT_EZ; HEAT-like repeat
      pfam18808
      Location:270 → 359
      Importin_rep_4; Importin repeat
      pfam18816
      Location:1007 → 1053
      Importin_rep_5; Importin repeat
      pfam18829
      Location:767 → 876
      Importin_rep_6; Importin repeat 6

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      145120594..145158303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040657683.2 → XP_040513617.1  importin-5

      UniProtKB/TrEMBL
      A0A8V0XP09
      Conserved Domains (6) summary
      COG5215
      Location:15 → 636
      KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
      sd00044
      Location:357 → 389
      HEAT; HEAT repeat [structural motif]
      pfam13513
      Location:923 → 968
      HEAT_EZ; HEAT-like repeat
      pfam18808
      Location:270 → 359
      Importin_rep_4; Importin repeat
      pfam18816
      Location:1007 → 1053
      Importin_rep_5; Importin repeat
      pfam18829
      Location:767 → 876
      Importin_rep_6; Importin repeat 6
    Nucleotide Protein Strain
    Heading Accession and Version

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