U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SUFU SUFU negative regulator of hedgehog signaling [ Gallus gallus (chicken) ]

    Gene ID: 374118, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    SUFUprovided by CGNC
    Full Name
    SUFU negative regulator of hedgehog signalingprovided by CGNC
    Primary source
    CGNC:6132
    See related
    Ensembl:ENSGALG00010018581
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SUFU in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (23969689..24057483)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (23861305..23948726)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 13A Neighboring gene ARP1 actin-related protein 1 homolog A, centractin alpha Neighboring gene tripartite motif containing 8 Neighboring gene ADP ribosylation factor like GTPase 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Vertebrate homologs of Drosophila suppressor of fused interact with the gli family of transcriptional regulators. Pearse RV 2nd, et al. Dev Biol, 1999 Aug 15. PMID 10433824, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic sequestering of transcription factor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    suppressor of fused homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396718.1 → NP_001383647.1  suppressor of fused homolog isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000232
      UniProtKB/TrEMBL
      A0A8V0ZE84, Q8QG94
      Related
      ENSGALP00010026868.1, ENSGALT00010044983.1

    2. NM_204264.2 → NP_989595.2  suppressor of fused homolog isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000232
      UniProtKB/TrEMBL
      Q8QG94

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      23969689..24057483
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046942683.1 → XP_046798639.1  suppressor of fused homolog isoform X1

      UniProtKB/TrEMBL
      Q8QG94

    2. XM_046942684.1 → XP_046798640.1  suppressor of fused homolog isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZE74, Q8QG94
      Related
      ENSGALP00010026858.1, ENSGALT00010044970.1

    3. XM_046942686.1 → XP_046798642.1  suppressor of fused homolog isoform X3

      UniProtKB/TrEMBL
      Q8QG94

    4. XM_046942688.1 → XP_046798644.1  suppressor of fused homolog isoform X4

      UniProtKB/TrEMBL
      Q8QG94

    5. XM_046942685.1 → XP_046798641.1  suppressor of fused homolog isoform X3

      UniProtKB/TrEMBL
      Q8QG94

    6. XM_046942687.1 → XP_046798643.1  suppressor of fused homolog isoform X4

      UniProtKB/TrEMBL
      Q8QG94
      Related
      ENSGALP00010026860.1, ENSGALT00010044974.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      23861305..23948726
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.