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    HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 [ Gallus gallus (chicken) ]

    Gene ID: 426582, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HECTD4provided by CGNC
    Official Full Name
    HECT domain containing E3 ubiquitin protein ligase 4provided by CGNC
    Primary source
    CGNC:52833
    See related
    Ensembl:ENSGALG00010025980
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    POTAGE; C12orf51; C15H12orf51
    Orthologs
    human mouse all
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    Genomic context

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    See HECTD4 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    76
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6319330..6386159, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6330066..6396815, complement)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene N(alpha)-acetyltransferase 25, NatB auxiliary subunit Neighboring gene TRAF-type zinc finger domain containing 1 Neighboring gene ribosomal protein L6 Neighboring gene protein tyrosine phosphatase non-receptor type 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable E3 ubiquitin-protein ligase HECTD4; LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HECTD4
    Names
    AF-1 specific protein phosphatase
    HECT domain-containing protein 4
    probable E3 ubiquitin-protein ligase C12orf51
    transmembrane protein C12orf51
    XP_040504368.1
    XP_040540509.1
    XP_040540510.1
    XP_040540511.1
    XP_040540512.1
    XP_040540513.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6319330..6386159 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040648434.2 → XP_040504368.1  LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HECTD4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZZS1
      Related
      ENSGALP00010039111.1, ENSGALT00010063370.1
      Conserved Domains (2) summary
      cd13735
      Location:2402 → 2557
      SPRY_HECT_like; SPRY domain in HECT E3
      cl27008
      Location:4020 → 4414
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6330066..6396815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040684577.2 → XP_040540511.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZZS1
      Conserved Domains (2) summary
      cd13735
      Location:2409 → 2564
      SPRY_HECT_like; SPRY domain in HECT E3
      cl27008
      Location:4027 → 4421
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

    2. XM_040684579.2 → XP_040540513.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZZS1
      Conserved Domains (2) summary
      cd13735
      Location:2400 → 2555
      SPRY_HECT_like; SPRY domain in HECT E3
      cl27008
      Location:4018 → 4412
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

    3. XM_040684576.2 → XP_040540510.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZZS1
      Conserved Domains (2) summary
      cd13735
      Location:2409 → 2564
      SPRY_HECT_like; SPRY domain in HECT E3
      cl27008
      Location:4027 → 4421
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

    4. XM_040684578.2 → XP_040540512.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZZS1
      Conserved Domains (2) summary
      cd13735
      Location:2402 → 2557
      SPRY_HECT_like; SPRY domain in HECT E3
      cl27008
      Location:4020 → 4414
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

    5. XM_040684575.2 → XP_040540509.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZZS1
      Conserved Domains (2) summary
      cd13735
      Location:2411 → 2566
      SPRY_HECT_like; SPRY domain in HECT E3
      cl27008
      Location:4029 → 4423
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    Nucleotide Protein Strain
    Heading Accession and Version

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