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    TUBB4B tubulin beta 4B class IVb [ Gallus gallus (chicken) ]

    Gene ID: 417255, updated on 17-Aug-2024

    Summary

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    Symbol
    TUBB4Bprovided by CGNC
    Full Name
    tubulin beta 4B class IVbprovided by CGNC
    Primary source
    CGNC:50466
    See related
    Ensembl:ENSGALG00010027543
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    TUBB2C
    Orthologs
    human mouse all
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    Genomic context

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    See TUBB4B in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (2547442..2549540, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (1956033..1958131, complement)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene discoidin domain receptor tyrosine kinase 2 like Neighboring gene microRNA 1707 Neighboring gene uncharacterized LOC121107056 Neighboring gene ciliary microtubule inner protein 2A Neighboring gene ectonucleoside triphosphate diphosphohydrolase 2 like Neighboring gene negative elongation factor complex member B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and expression of the chicken beta 3 tubulin gene. A vertebrate testis beta-tubulin isotype. Sullivan KF, et al. J Biol Chem, 1986 Oct 5. PMID 3759966
    2. Uncoupling of UNC5C with Polymerized TUBB3 in Microtubules Mediates Netrin-1 Repulsion. Shao Q, et al. J Neurosci, 2017 Jun 7. PMID 28483977, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin beta-3 chain
    Names
    beta-tubulin class-IV
    tubulin, beta 2C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080860.3 → NP_001074329.2  tubulin beta-3 chain

      See identical proteins and their annotated locations for NP_001074329.2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000308
      UniProtKB/Swiss-Prot
      P09206
      Related
      ENSGALP00010040845.1, ENSGALT00010066714.1
      Conserved Domains (1) summary
      PLN00220
      Location:1 → 429
      PLN00220; tubulin beta chain; Provisional

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2547442..2549540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1956033..1958131 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P09206.1 GenPept UniProtKB/Swiss-Prot:P09206

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.