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    FICD FIC domain containing [ Gallus gallus (chicken) ]

    Gene ID: 416889, updated on 17-Aug-2024

    Summary

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    Symbol
    FICDprovided by CGNC
    Full Name
    FIC domain containingprovided by CGNC
    Primary source
    CGNC:50368
    See related
    Ensembl:ENSGALG00010022441
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See FICD in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6517281..6521498)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6527795..6532013)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene WSC domain containing 2 Neighboring gene chemerin chemokine-like receptor 1 Neighboring gene squamous cell carcinoma antigen recognized by T-cells 3 Neighboring gene iron-sulfur cluster assembly enzyme Neighboring gene transmembrane protein 119

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein adenylyltransferase FICD
    XP_004945669.1
    XP_040540608.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6517281..6521498
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004945612.5 → XP_004945669.1  protein adenylyltransferase FICD

      UniProtKB/TrEMBL
      A0A8V0ZQ41, A0A8V0ZVQ8
      Related
      ENSGALP00010032951.1, ENSGALT00010054545.1
      Conserved Domains (3) summary
      COG0457
      Location:139 → 234
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG3177
      Location:269 → 478
      COG3177; Fic family protein [Transcription]
      sd00006
      Location:148 → 176
      TPR; TPR repeat [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6527795..6532013
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040684674.2 → XP_040540608.1  protein adenylyltransferase FICD

      UniProtKB/TrEMBL
      A0A8V0ZQ41, A0A8V0ZVQ8
      Conserved Domains (3) summary
      COG0457
      Location:139 → 234
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG3177
      Location:269 → 478
      COG3177; Fic family protein [Transcription]
      sd00006
      Location:148 → 176
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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