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    PRTFDC1 phosphoribosyl transferase domain containing 1 [ Gallus gallus (chicken) ]

    Gene ID: 420499, updated on 17-Aug-2024

    Summary

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    Symbol
    PRTFDC1provided by CGNC
    Full Name
    phosphoribosyl transferase domain containing 1provided by CGNC
    Primary source
    CGNC:5813
    See related
    Ensembl:ENSGALG00010005118
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PRTFDC1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (16659132..16706778)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (16687055..16734437)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene threonine synthase like 1 Neighboring gene enkurin, TRPC channel interacting protein Neighboring gene Rho GTPase activating protein 21 Neighboring gene uncharacterized LOC121109773 Neighboring gene KIAA1217

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hypoxanthine phosphoribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in purine ribonucleoside salvage IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphoribosyltransferase domain-containing protein 1
    NP_001186514.1
    XP_015136863.1
    XP_015136864.1
    XP_046766944.1
    XP_046766945.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199585.2 → NP_001186514.1  phosphoribosyltransferase domain-containing protein 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000036
      UniProtKB/TrEMBL
      E1C5K1
      Related
      ENSGALP00010006717.1, ENSGALT00010012031.1
      Conserved Domains (1) summary
      cl00309
      Location:16 → 225
      PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      16659132..16706778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015281378.4 → XP_015136864.1  phosphoribosyltransferase domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XPF7
      Related
      ENSGALP00010006720.1, ENSGALT00010012038.1
      Conserved Domains (1) summary
      cl00309
      Location:16 → 185
      PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

    2. XM_015281377.4 → XP_015136863.1  phosphoribosyltransferase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XLN3
      Related
      ENSGALP00010006719.1, ENSGALT00010012035.1
      Conserved Domains (1) summary
      cl00309
      Location:16 → 219
      PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      16687055..16734437
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046910989.1 → XP_046766945.1  phosphoribosyltransferase domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XPF7

    2. XM_046910988.1 → XP_046766944.1  phosphoribosyltransferase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XLN3
    Nucleotide Protein Strain
    Heading Accession and Version

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