U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SLC4A1AP solute carrier family 4 member 1 adaptor protein [ Gallus gallus (chicken) ]

    Gene ID: 421420, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    SLC4A1APprovided by CGNC
    Full Name
    solute carrier family 4 member 1 adaptor proteinprovided by CGNC
    Primary source
    CGNC:7638
    See related
    Ensembl:ENSGALG00010020080
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SLC4A1AP in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (27475649..27492296, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (27401456..27418064, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110339 Neighboring gene uncharacterized LOC421419 Neighboring gene SPT7-like STAGA complex gamma subunit Neighboring gene uncharacterized LOC112532074 Neighboring gene leucine rich repeat and fibronectin type III domain containing 2 Neighboring gene uncharacterized LOC107052917

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    kanadaptin
    Names
    solute carrier family 4 (anion exchanger), member 1, adaptor protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      27475649..27492296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046939301.1 → XP_046795257.1  kanadaptin isoform X4

    2. XM_040698195.1 → XP_040554129.1  kanadaptin isoform X3

      Conserved Domains (1) summary
      cd19856
      Location:213 → 295
      DSRM_Kanadaptin; double-stranded RNA binding motif of Kanadaptin and similar proteins

    3. XM_015283809.4 → XP_015139295.2  kanadaptin isoform X2

      Conserved Domains (2) summary
      cd00060
      Location:68 → 172
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      cd19856
      Location:257 → 339
      DSRM_Kanadaptin; double-stranded RNA binding motif of Kanadaptin and similar proteins

    4. XM_015283808.4 → XP_015139294.2  kanadaptin isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZCH4
      Related
      ENSGALP00010028606.1, ENSGALT00010048512.1
      Conserved Domains (2) summary
      cd00060
      Location:68 → 172
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      cd19856
      Location:257 → 339
      DSRM_Kanadaptin; double-stranded RNA binding motif of Kanadaptin and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      27401456..27418064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046914502.1 → XP_046770458.1  kanadaptin isoform X4

    2. XM_040667727.1 → XP_040523661.1  kanadaptin isoform X3

      Conserved Domains (1) summary
      cd19856
      Location:213 → 295
      DSRM_Kanadaptin; double-stranded RNA binding motif of Kanadaptin and similar proteins

    3. XM_040667726.2 → XP_040523660.1  kanadaptin isoform X2

      Conserved Domains (2) summary
      cd00060
      Location:68 → 172
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      cd19856
      Location:257 → 339
      DSRM_Kanadaptin; double-stranded RNA binding motif of Kanadaptin and similar proteins

    4. XM_040667725.2 → XP_040523659.1  kanadaptin isoform X1

      Conserved Domains (2) summary
      cd00060
      Location:68 → 172
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      cd19856
      Location:257 → 339
      DSRM_Kanadaptin; double-stranded RNA binding motif of Kanadaptin and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials