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    THOC2 THO complex 2 [ Gallus gallus (chicken) ]

    Gene ID: 422361, updated on 17-Aug-2024

    Summary

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    Symbol
    THOC2provided by CGNC
    Full Name
    THO complex 2provided by CGNC
    Primary source
    CGNC:6452
    See related
    Ensembl:ENSGALG00010013305
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See THOC2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (15640175..15693024)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (15673351..15726201)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene stromal antigen 2 Neighboring gene baculoviral IAP repeat containing 8 Neighboring gene glutamate ionotropic receptor AMPA type subunit 3 Neighboring gene uncharacterized LOC101750610 Neighboring gene uncharacterized LOC121113228

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of THO complex part of transcription export complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    THO complex subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      15640175..15693024
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040700165.2 → XP_040556099.1  THO complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YJR6

    2. XM_420332.8 → XP_420332.2  THO complex subunit 2 isoform X2

      See identical proteins and their annotated locations for XP_420332.2

      UniProtKB/TrEMBL
      A0A3S5ZP33, A0A8V0YJR6
      Related
      ENSGALP00010018801.1, ENSGALT00010032011.1
      Conserved Domains (3) summary
      pfam11262
      Location:871 → 1170
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:565 → 639
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:8 → 563
      THOC2_N; THO complex subunit 2 N-terminus

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15673351..15726201
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040670741.2 → XP_040526675.1  THO complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YJR6

    2. XM_040670742.2 → XP_040526676.1  THO complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      A0A3S5ZP33, A0A8V0YJR6
      Conserved Domains (3) summary
      pfam11262
      Location:871 → 1170
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:565 → 639
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:8 → 563
      THOC2_N; THO complex subunit 2 N-terminus
    Nucleotide Protein Strain
    Heading Accession and Version

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