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    CLVS1 clavesin 1 [ Gallus gallus (chicken) ]

    Gene ID: 421141, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLVS1provided by CGNC
    Official Full Name
    clavesin 1provided by CGNC
    Primary source
    CGNC:11536
    See related
    Ensembl:ENSGALG00010003877
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    RLBP1L1; clavesin-1
    Orthologs
    human mouse all
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    Genomic context

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    See CLVS1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (112888108..112985659)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (112894046..112991468)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101750226 Neighboring gene uncharacterized LOC107052736 Neighboring gene aspartate beta-hydroxylase Neighboring gene Na+/K+ transporting ATPase interacting 3 Neighboring gene gamma-glutamyl hydrolase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    clavesin-1
    Names
    retinaldehyde binding protein 1-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      112888108..112985659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_419223.8 → XP_419223.2  clavesin-1

      UniProtKB/TrEMBL
      A0A1D5PCW1, A0A8V0XF18
      Related
      ENSGALP00010005295.1, ENSGALT00010008973.1
      Conserved Domains (2) summary
      smart01100
      Location:29 → 75
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
      cd00170
      Location:106 → 252
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      112894046..112991468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040666271.2 → XP_040522205.1  clavesin-1

      UniProtKB/TrEMBL
      A0A1D5PCW1, A0A8V0XF18
      Conserved Domains (2) summary
      smart01100
      Location:29 → 75
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
      cd00170
      Location:106 → 252
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
    Nucleotide Protein Strain
    Heading Accession and Version

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