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    SEPTIN8 septin 8 [ Gallus gallus (chicken) ]

    Gene ID: 416333, updated on 3-Dec-2024

    Summary

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    Official Symbol
    SEPTIN8provided by CGNC
    Official Full Name
    septin 8provided by CGNC
    Primary source
    CGNC:5210
    See related
    Ensembl:ENSGALG00010016402
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SEPT8; Sep-08
    Orthologs
    human mouse all
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    Genomic context

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    See SEPTIN8 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (16593166..16625479, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (16604940..16637578, complement)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 3A Neighboring gene cyclin I family member 2 Neighboring gene sosondowah ankyrin repeat domain family member A Neighboring gene shroom family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725
    2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton-dependent cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell division site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of septin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in septin ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    septin-8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277806.2 → NP_001264735.2  septin-8

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000256
      UniProtKB/TrEMBL
      A0A8V0YP70, A0A8V0YVM0
      Related
      ENSGALP00010022797.1, ENSGALT00010039508.1
      Conserved Domains (2) summary
      PTZ00121
      Location:273 → 381
      PTZ00121; MAEBL; Provisional
      cd01850
      Location:39 → 307
      CDC_Septin; CDC/Septin GTPase family

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      16593166..16625479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025154866.3 → XP_025010634.1  septin-8 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YP70
      Related
      ENSGALP00010022806.1, ENSGALT00010039517.1
      Conserved Domains (2) summary
      cd01850
      Location:39 → 305
      CDC_Septin; CDC/Septin GTPase family
      cl26511
      Location:271 → 379
      Neuromodulin_N; Gap junction protein N-terminal region

    2. XM_015294031.4 → XP_015149517.1  septin-8 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2U387, A0A8V0YP70
      Related
      ENSGALP00010022802.1, ENSGALT00010039513.1
      Conserved Domains (2) summary
      cd01850
      Location:39 → 307
      CDC_Septin; CDC/Septin GTPase family
      COG5019
      Location:21 → 382
      CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

    3. XM_025154867.3 → XP_025010635.1  septin-8 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YP70
      Conserved Domains (2) summary
      cd01850
      Location:39 → 305
      CDC_Septin; CDC/Septin GTPase family
      cl26511
      Location:271 → 379
      Neuromodulin_N; Gap junction protein N-terminal region

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      16604940..16637578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927035.1 → XP_046782991.1  septin-8 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YP70

    2. XM_046927034.1 → XP_046782990.1  septin-8 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2U387, A0A8V0YP70

    3. XM_046927036.1 → XP_046782992.1  septin-8 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YP70
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials