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    RBKS ribokinase [ Gallus gallus (chicken) ]

    Gene ID: 421418, updated on 17-Aug-2024

    Summary

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    Symbol
    RBKSprovided by CGNC
    Full Name
    ribokinaseprovided by CGNC
    Primary source
    CGNC:7635
    See related
    Ensembl:ENSGALG00010020057
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RBKS in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (27268275..27333271)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (27194234..27259003)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124418348 Neighboring gene translation initiation factor IF-2-like Neighboring gene brain and reproductive organ-expressed (TNFRSF1A modulator) Neighboring gene uncharacterized LOC107052918 Neighboring gene uncharacterized LOC121110340 Neighboring gene uncharacterized LOC112532161 Neighboring gene mitochondrial ribosomal protein L33 Neighboring gene transfer RNA opal suppressor (anticodon UCA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ribokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in D-ribose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribokinase
    XP_040523663.1
    XP_040523664.1
    XP_040554130.1
    XP_419471.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      27268275..27333271
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040698196.2 → XP_040554130.1  ribokinase isoform X2

      UniProtKB/TrEMBL
      F1N8A7
      Conserved Domains (1) summary
      TIGR02152
      Location:7 → 300
      D_ribokin_bact; ribokinase

    2. XM_419471.8 → XP_419471.4  ribokinase isoform X1

      UniProtKB/TrEMBL
      F1N8A7
      Related
      ENSGALP00010028575.1, ENSGALT00010048464.1
      Conserved Domains (1) summary
      cd01174
      Location:5 → 300
      ribokinase; Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      27194234..27259003
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040667730.2 → XP_040523664.1  ribokinase isoform X2

      UniProtKB/TrEMBL
      F1N8A7
      Conserved Domains (1) summary
      TIGR02152
      Location:7 → 300
      D_ribokin_bact; ribokinase

    2. XM_040667729.2 → XP_040523663.1  ribokinase isoform X1

      UniProtKB/TrEMBL
      F1N8A7
      Conserved Domains (1) summary
      cd01174
      Location:5 → 300
      ribokinase; Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides ...
    Nucleotide Protein Strain
    Heading Accession and Version

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