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    MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 [ Gallus gallus (chicken) ]

    Gene ID: 423563, updated on 17-Aug-2024

    Summary

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    Symbol
    MDGA2provided by CGNC
    Full Name
    MAM domain containing glycosylphosphatidylinositol anchor 2provided by CGNC
    Primary source
    CGNC:51996
    See related
    Ensembl:ENSGALG00010018983
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See MDGA2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (56492012..56854741, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (56406641..56736459, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene uncharacterized LOC107053606 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 Neighboring gene uncharacterized LOC107051811 Neighboring gene transfer RNA histidin (anticodon GUG)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MAM domain-containing glycosylphosphatidylinositol anchor protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      56492012..56854741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025150963.3 → XP_025006731.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 2

      UniProtKB/TrEMBL
      A0A8V0Z888, A0A8V0ZFN8
      Related
      ENSGALP00010027377.1, ENSGALT00010045953.1
      Conserved Domains (7) summary
      smart00408
      Location:256 → 317
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:48 → 128
      IG; Immunoglobulin
      smart00410
      Location:154 → 219
      IG_like; Immunoglobulin like
      pfam00629
      Location:764 → 936
      MAM; MAM domain, meprin/A5/mu
      pfam13927
      Location:441 → 518
      Ig_3; Immunoglobulin domain
      cd00096
      Location:244 → 248
      Ig; Ig strand A [structural motif]
      cl11960
      Location:349 → 424
      Ig; Immunoglobulin domain

    RNA

    1. XR_005860157.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      56406641..56736459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040672842.2 → XP_040528776.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 2

      UniProtKB/TrEMBL
      A0A8V0Z888, A0A8V0ZFN8
      Conserved Domains (7) summary
      smart00408
      Location:256 → 317
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:48 → 128
      IG; Immunoglobulin
      smart00410
      Location:154 → 219
      IG_like; Immunoglobulin like
      pfam00629
      Location:764 → 936
      MAM; MAM domain, meprin/A5/mu
      pfam13927
      Location:441 → 518
      Ig_3; Immunoglobulin domain
      cd00096
      Location:244 → 248
      Ig; Ig strand A [structural motif]
      cl11960
      Location:349 → 424
      Ig; Immunoglobulin domain

    RNA

    1. XR_005850538.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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