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    STAG1 stromal antigen 1 [ Gallus gallus (chicken) ]

    Gene ID: 424735, updated on 3-Dec-2024

    Summary

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    Symbol
    STAG1provided by CGNC
    Full Name
    stromal antigen 1provided by CGNC
    Primary source
    CGNC:871
    See related
    Ensembl:ENSGALG00010022783
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See STAG1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (296043..478354, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (221338..403648, complement)

    Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 regulatory subunit B''alpha Neighboring gene MSL complex subunit 2 Neighboring gene propionyl-CoA carboxylase beta subunit Neighboring gene uncharacterized LOC112532999 Neighboring gene solute carrier family 35 member G2 Neighboring gene uncharacterized LOC424740 Neighboring gene selenocysteine lyase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cohesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cohesin subunit SA-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      296043..478354 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025153521.3 → XP_025009289.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1
      Conserved Domains (1) summary
      pfam08514
      Location:23 → 131
      STAG; STAG domain

    2. XM_015291354.4 → XP_015146840.1  cohesin subunit SA-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZSS1
      Conserved Domains (1) summary
      pfam08514
      Location:63 → 171
      STAG; STAG domain

    3. XM_015291353.4 → XP_015146839.1  cohesin subunit SA-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZRW1, A0A8V0ZXE1
      Related
      ENSGALP00010033545.1, ENSGALT00010055398.1
      Conserved Domains (1) summary
      pfam08514
      Location:160 → 268
      STAG; STAG domain

    4. XM_015291352.4 → XP_015146838.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1
      Conserved Domains (1) summary
      pfam08514
      Location:165 → 273
      STAG; STAG domain

    5. XM_046898682.1 → XP_046754638.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1
      Related
      ENSGALP00010033551.1, ENSGALT00010055408.1

    6. XM_040705999.2 → XP_040561933.1  cohesin subunit SA-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZRW1, A0A8V0ZXE1
      Conserved Domains (1) summary
      pfam08514
      Location:160 → 268
      STAG; STAG domain

    7. XM_046898683.1 → XP_046754639.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1

    8. XM_046898681.1 → XP_046754637.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1

    9. XM_040706000.2 → XP_040561934.1  cohesin subunit SA-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZSS1
      Conserved Domains (1) summary
      pfam08514
      Location:63 → 171
      STAG; STAG domain

    10. XM_046898686.1 → XP_046754642.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1

    11. XM_046898687.1 → XP_046754643.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1

    12. XM_046898684.1 → XP_046754640.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1

    RNA

    1. XR_005862323.2 RNA Sequence

    2. XR_005862321.2 RNA Sequence

    3. XR_005862322.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      221338..403648 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040679147.2 → XP_040535081.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1
      Conserved Domains (1) summary
      pfam08514
      Location:23 → 131
      STAG; STAG domain

    2. XM_040679145.2 → XP_040535079.1  cohesin subunit SA-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZSS1
      Conserved Domains (1) summary
      pfam08514
      Location:63 → 171
      STAG; STAG domain

    3. XM_040679143.2 → XP_040535077.1  cohesin subunit SA-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZRW1, A0A8V0ZXE1
      Conserved Domains (1) summary
      pfam08514
      Location:160 → 268
      STAG; STAG domain

    4. XM_040679142.2 → XP_040535076.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1
      Conserved Domains (1) summary
      pfam08514
      Location:165 → 273
      STAG; STAG domain

    5. XM_046924069.1 → XP_046780025.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1

    6. XM_040679144.2 → XP_040535078.1  cohesin subunit SA-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZRW1, A0A8V0ZXE1
      Conserved Domains (1) summary
      pfam08514
      Location:160 → 268
      STAG; STAG domain

    7. XM_046924070.1 → XP_046780026.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1

    8. XM_046924068.1 → XP_046780024.1  cohesin subunit SA-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZRW1

    9. XM_040679146.2 → XP_040535080.1  cohesin subunit SA-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZSS1
      Conserved Domains (1) summary
      pfam08514
      Location:63 → 171
      STAG; STAG domain

    10. XM_046924072.1 → XP_046780028.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1

    11. XM_046924073.1 → XP_046780029.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1

    12. XM_046924071.1 → XP_046780027.1  cohesin subunit SA-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZSS1

    RNA

    1. XR_005852565.2 RNA Sequence

    2. XR_005852563.2 RNA Sequence

    3. XR_005852564.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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