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    Garin4 golgi associated RAB2 interactor family member 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498311, updated on 9-Dec-2024

    Summary

    Official Symbol
    Garin4provided by RGD
    Official Full Name
    golgi associated RAB2 interactor family member 4provided by RGD
    Primary source
    RGD:1561646
    See related
    EnsemblRapid:ENSRNOG00000029371 AllianceGenome:RGD:1561646
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Fam71a; RGD1561646
    Summary
    Predicted to be involved in Golgi organization. Predicted to be located in Golgi apparatus. Orthologous to human GARIN4 (golgi associated RAB2 interactor family member 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Garin4 in Genome Data Viewer
    Location:
    13q27
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (105274107..105276287, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (102742988..102745168, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (109768019..109770199, complement)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120096350 Neighboring gene basic leucine zipper ATF-like transcription factor 3 Neighboring gene activating transcription factor 3 Neighboring gene uncharacterized LOC102555043 Neighboring gene uncharacterized LOC102555129 Neighboring gene neudesin neurotrophic factor

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    Golgi-associated RAB2 interactor protein 4
    Names
    family with sequence similarity 71, member A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109084.1NP_001102554.1  Golgi-associated RAB2 interactor protein 4

      See identical proteins and their annotated locations for NP_001102554.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473985
      UniProtKB/TrEMBL
      A6JGZ0, D3ZUI0
      Related
      ENSRNOP00000051288.3, ENSRNOT00000043672.6
      Conserved Domains (1) summary
      pfam12480
      Location:113184
      DUF3699; Protein of unknown function (DUF3699)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      105274107..105276287 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)