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    ptp-5.3 Tyrosine-protein phosphatase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171660, updated on 2-Nov-2024

    Summary

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    Official Symbol
    ptp-5.3
    Official Full Name
    Tyrosine-protein phosphatase domain-containing protein
    Primary source
    WormBase:WBGene00021207
    Locus tag
    CELE_Y18H1A.1
    See related
    AllianceGenome:WB:WBGene00021207
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See ptp-5.3 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (688257..691332)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Glycosyltransferase family 92 protein Neighboring gene choline-phosphate cytidylyltransferase Neighboring gene non-specific serine/threonine protein kinase Neighboring gene Histidine phosphatase family protein Neighboring gene CBF1-interacting co-repressor CIR N-terminal domain-containing protein;Cir_N domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Tyrosine-protein phosphatase domain-containing protein
    NP_490769.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      688257..691332
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058368.6 → NP_490769.2  Tyrosine-protein phosphatase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_490769.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9BL95
      Conserved Domains (1) summary
      smart00194
      Location:186 → 433
      PTPc; Protein tyrosine phosphatase, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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