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    sdz-19 SKN-1 Dependent Zygotic transcript [ Caenorhabditis elegans ]

    Gene ID: 181407, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sdz-19
    Official Full Name
    SKN-1 Dependent Zygotic transcript
    Primary source
    WormBase:WBGene00009728
    Locus tag
    CELE_F45E6.6
    See related
    AllianceGenome:WB:WBGene00009728
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in negative regulation of vulval development. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sdz-19 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Sequence:
    Chromosome: X; NC_003284.9 (12502868..12503338, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Rab-GAP TBC domain-containing protein Neighboring gene ncRNA Neighboring gene Lipase Neighboring gene Suppressor of Constitutive Dauer formation Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overcoming redundancy: an RNAi enhancer screen for morphogenesis genes in Caenorhabditis elegans. Sawyer JM, et al. Genetics, 2011 Jul. PMID 21527776, Free PMC Article
    2. A global analysis of genetic interactions in Caenorhabditis elegans. Byrne AB, et al. J Biol, 2007. PMID 17897480, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in negative regulation of vulval development IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SKN-1 Dependent Zygotic transcript
    NP_510097.2
    • Product from WormBase gene class sdz;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      12502868..12503338 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077696.7 → NP_510097.2  SKN-1 Dependent Zygotic transcript [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62242
    Nucleotide Protein
    Heading Accession and Version

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