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    cec-2 Chromo domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176934, updated on 18-Sep-2024

    Summary

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    Official Symbol
    cec-2
    Official Full Name
    Chromo domain-containing protein
    Primary source
    WormBase:WBGene00016796
    Locus tag
    CELE_C50A2.2
    See related
    AllianceGenome:WB:WBGene00016796
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See cec-2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (1170708..1177776)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ETS domain-containing protein Neighboring gene PAN-3 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Piwi domain-containing protein Neighboring gene ncRNA Neighboring gene RecQ-mediated genome instability protein 2 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A transcriptional cofactor regulatory network for the C. elegans intestine. Horowitz BB, et al. G3 (Bethesda), 2023 Jul 5. PMID 37119809, Free PMC Article
    2. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article
    3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    Chromo domain-containing protein
    NP_001294531.1
    • Confirmed by transcript evidence
    NP_001294532.1
    • Confirmed by transcript evidence
    NP_001294533.1
    • Confirmed by transcript evidence
    NP_001294534.1
    • Confirmed by transcript evidence
    NP_500047.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1170708..1177776
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067646.7 → NP_500047.2  Chromo domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500047.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44139
      Conserved Domains (1) summary
      smart00298
      Location:32 → 87
      CHROMO; Chromatin organization modifier domain

    2. NM_001307602.3 → NP_001294531.1  Chromo domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294531.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PF13

    3. NM_001307603.3 → NP_001294532.1  Chromo domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294532.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PBT4

    4. NM_001307604.3 → NP_001294533.1  Chromo domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294533.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PC61

    5. NM_001307605.3 → NP_001294534.1  Chromo domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294534.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PMK7
    Nucleotide Protein
    Heading Accession and Version

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