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    Y49E10.21 Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1 [ Caenorhabditis elegans ]

    Gene ID: 190069, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Y49E10.21
    Official Full Name
    Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1
    Primary source
    WormBase:WBGene00013040
    Locus tag
    CELE_Y49E10.21
    See related
    AllianceGenome:WB:WBGene00013040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Y49E10.21 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    7
    Sequence:
    Chromosome: III; NC_003281.10 (12457597..12466517)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Anillin-like protein 1 Neighboring gene Sensory neuron membrane protein 2 Neighboring gene Phosphoryl Seryl-TRNA (Ser/Sec) Kinase Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1
    NP_001255173.1
    • Confirmed by transcript evidence
    NP_001367267.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      12457597..12466517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268244.3 → NP_001255173.1  Conserved oligomeric Golgi complex subunit 7 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255173.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XTU2
      Conserved Domains (1) summary
      COG1196
      Location:2 → 167
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001379954.3 → NP_001367267.1  RAD50-interacting protein 1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1B6W2
      Conserved Domains (1) summary
      COG1196
      Location:2 → 167
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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