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    Y113G7C.1 Protein-tyrosine-phosphatase [ Caenorhabditis elegans ]

    Gene ID: 180332, updated on 9-Dec-2024

    Summary

    Official Symbol
    Y113G7C.1
    Official Full Name
    Protein-tyrosine-phosphatase
    Primary source
    WormBase:WBGene00013771
    Locus tag
    CELE_Y113G7C.1
    See related
    AllianceGenome:WB:WBGene00013771
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Y113G7C.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (20317742..20324032)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene FRIGIDA-like protein Neighboring gene PAN-3 domain-containing protein Neighboring gene ncRNA Neighboring gene DUF19 domain-containing protein Neighboring gene Activin_recp domain-containing protein;UPAR/Ly6 domain-containing protein

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Protein-tyrosine-phosphatase
    NP_507918.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      20317742..20324032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075517.5NP_507918.1  Protein-tyrosine-phosphatase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507918.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWA6
      Conserved Domains (4) summary
      smart00453
      Location:172239
      WSN; Worm-specific (usually) N-terminal domain
      cd00047
      Location:11961428
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      pfam00102
      Location:11941426
      Y_phosphatase; Protein-tyrosine phosphatase
      pfam05672
      Location:10151145
      MAP7; MAP7 (E-MAP-115) family