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    F57B7.2 SCP domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 186438, updated on 9-Dec-2024

    Summary

    Official Symbol
    F57B7.2
    Official Full Name
    SCP domain-containing protein
    Primary source
    WormBase:WBGene00010192
    Locus tag
    CELE_F57B7.2
    See related
    AllianceGenome:WB:WBGene00010192
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See F57B7.2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (11441916..11443603, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene G-protein coupled receptor dmsr-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Metalloprotease mig-17

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in extracellular space  

    General protein information

    Preferred Names
    SCP domain-containing protein
    NP_001256323.1
    • Confirmed by transcript evidence
    NP_001367203.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      11441916..11443603 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269394.2NP_001256323.1  SCP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256323.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20928
      Conserved Domains (1) summary
      cd05382
      Location:112245
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins
    2. NM_001380764.1NP_001367203.1  SCP domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      B6EU60
      Conserved Domains (1) summary
      cd05382
      Location:153286
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins
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