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    Ggt5 gamma-glutamyltransferase 5 [ Mus musculus (house mouse) ]

    Gene ID: 23887, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ggt5provided by MGI
    Official Full Name
    gamma-glutamyltransferase 5provided by MGI
    Primary source
    MGI:MGI:1346063
    See related
    Ensembl:ENSMUSG00000006344 AllianceGenome:MGI:1346063
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GGL; Ggtla1; GGT-REL
    Summary
    Enables leukotriene-C(4) hydrolase. Acts upstream of or within inflammatory response and leukotriene D4 biosynthetic process. Located in plasma membrane. Orthologous to human GGT5 (gamma-glutamyltransferase 5). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in ovary adult (RPKM 21.4), mammary gland adult (RPKM 16.4) and 15 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ggt5 in Genome Data Viewer
    Location:
    10 C1; 10 38.55 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (75425161..75453034)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (75589327..75617200)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 75B Neighboring gene gamma-glutamyltransferase 1 Neighboring gene STARR-positive B cell enhancer ABC_E5147 Neighboring gene predicted gene, 26402 Neighboring gene predicted gene, 19688 Neighboring gene sushi domain containing 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC132842

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables glutathione hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables glutathione hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables glutathione hydrolase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables leukotriene C4 gamma-glutamyl transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables leukotriene-C(4) hydrolase IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables leukotriene-C(4) hydrolase IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables leukotriene-C(4) hydrolase ISO
    Inferred from Sequence Orthology
    more info
     
    enables peptidyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables peptidyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in amino acid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in fatty acid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in glutathione biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in glutathione catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in glutathione catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in glutathione catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within inflammatory response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in leukotriene D4 biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within leukotriene D4 biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within leukotriene D4 biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in leukotriene D4 biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proteolysis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    glutathione hydrolase 5 proenzyme
    Names
    gamma-glutamyl leukotrienase
    gamma-glutamyltransferase-like activity 1
    gamma-glutamyltranspeptidase 5
    leukotriene-C4 hydrolase
    NP_001346354.1
    NP_035950.2
    XP_006513710.1
    XP_030100950.1
    XP_036011677.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001359425.2NP_001346354.1  glutathione hydrolase 5 proenzyme isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC087540
      Conserved Domains (1) summary
      cl19223
      Location:1296
      G_glu_transpept; Gamma-glutamyltranspeptidase
    2. NM_001428895.1NP_001415824.1  glutathione hydrolase 5 proenzyme isoform 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AC087540
    3. NM_001428896.1NP_001415825.1  glutathione hydrolase 5 proenzyme isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC087540
    4. NM_011820.6NP_035950.2  glutathione hydrolase 5 proenzyme isoform 1 precursor

      See identical proteins and their annotated locations for NP_035950.2

      Status: VALIDATED

      Source sequence(s)
      AC087540
      Consensus CDS
      CCDS23928.1
      UniProtKB/Swiss-Prot
      Q8C7B4, Q9Z2A9
      Related
      ENSMUSP00000072074.3, ENSMUST00000072217.9
      Conserved Domains (1) summary
      pfam01019
      Location:60568
      G_glu_transpept; Gamma-glutamyltranspeptidase

    RNA

    1. NR_153110.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC087540

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      75425161..75453034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030245090.1XP_030100950.1  glutathione hydrolase 5 proenzyme isoform X2

      Related
      ENSMUST00000219247.2
      Conserved Domains (1) summary
      cl19223
      Location:2324
      G_glu_transpept; Gamma-glutamyltranspeptidase
    2. XM_006513647.4XP_006513710.1  glutathione hydrolase 5 proenzyme isoform X1

      Conserved Domains (1) summary
      cl19223
      Location:58425
      G_glu_transpept; Gamma-glutamyltranspeptidase
    3. XM_036155784.1XP_036011677.1  glutathione hydrolase 5 proenzyme isoform X3

      Conserved Domains (1) summary
      cl19223
      Location:1296
      G_glu_transpept; Gamma-glutamyltranspeptidase

    RNA

    1. XR_001779525.3 RNA Sequence