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    LINC00615 long intergenic non-protein coding RNA 615 [ Homo sapiens (human) ]

    Gene ID: 439916, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC00615provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 615provided by HGNC
    Primary source
    HGNC:HGNC:26343
    See related
    Ensembl:ENSG00000196243 AllianceGenome:HGNC:26343
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C12orf37
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC00615 in Genome Data Viewer
    Location:
    12q21.33
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (90918023..90948669)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (90895531..90926177)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (91311800..91342446)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369895 Neighboring gene uncharacterized LOC124903074 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr12:91203521-91204720 Neighboring gene Sharpr-MPRA regulatory region 14687 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6716 Neighboring gene coiled-coil glutamate rich protein 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:91377884-91378418 Neighboring gene epiphycan

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038868.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC078873, AC123024, AC123025
      Related
      ENST00000546725.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      90918023..90948669
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      90895531..90926177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001039384.1: Suppressed sequence

      Description
      NM_001039384.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.