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    IQD25 IQ-domain 25 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829036, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IQD25
    Official Full Name
    IQ-domain 25
    Primary source
    TAIR:AT4G29150
    Locus tag
    AT4G29150
    See related
    Araport:AT4G29150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19B15.180; F19B15_180; IQ-domain 25
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    Genomic context

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    See IQD25 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (14378706..14380512)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene MATE efflux family protein Neighboring gene SNF7 family protein Neighboring gene Mnd1 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119059.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    IQ-domain 25
    NP_194644.2
    • IQ-domain 25 (IQD25); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 784 Blast hits to 779 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 2; Plants - 731; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14378706..14380512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119059.4 → NP_194644.2  IQ-domain 25 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194644.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JMV6, Q9SZE3
      UniProtKB/TrEMBL
      A0A178V3F0, A0A654FUA7
      Conserved Domains (3) summary
      smart00015
      Location:129 → 151
      IQ; Calmodulin-binding motif
      COG5022
      Location:131 → 228
      COG5022; Myosin heavy chain [General function prediction only]
      pfam13178
      Location:335 → 368
      DUF4005; Protein of unknown function (DUF4005)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JMV6.1

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