U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PABPC1 poly(A) binding protein cytoplasmic 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 282296, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    PABPC1provided by VGNC
    Official Full Name
    poly(A) binding protein cytoplasmic 1provided by VGNC
    Primary source
    VGNC:VGNC:53870
    See related
    EnsemblRapid:ENSBTAG00070008302
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    PABP-1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PABPC1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (63625778..63643551)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 7-like Neighboring gene uncharacterized LOC101905128 Neighboring gene transfer RNA tyrosine (anticodon AUA) Neighboring gene sorting nexin 31 Neighboring gene histone-lysine N-methyltransferase SETMAR-like Neighboring gene ankyrin repeat domain 46

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Poly(A)-binding protein and eRF3 are associated in vivo in human and Xenopus cells. Cosson B, et al. Biol Cell, 2002 Sep. PMID 12489690
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A) binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(U) RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    polyadenylate-binding protein 1
    Names
    poly(A)-binding protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174568.3 → NP_776993.1  polyadenylate-binding protein 1

      See identical proteins and their annotated locations for NP_776993.1

      Status: VALIDATED

      Source sequence(s)
      DV806286, DV850814, EE252871, EE252928, EH131059, EV617074
      UniProtKB/Swiss-Prot
      P61286, Q3T0J7
      UniProtKB/TrEMBL
      A0AAA9S074
      Related
      ENSBTAP00070011141.1, ENSBTAT00070018868.1
      Conserved Domains (1) summary
      TIGR01628
      Location:11 → 615
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      63625778..63643551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P61286.1 GenPept UniProtKB/Swiss-Prot:P61286

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.