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    RTTN rotatin [ Bos taurus (domestic cattle) ]

    Gene ID: 615378, updated on 30-Jan-2025

    Summary

    Official Symbol
    RTTNprovided by VGNC
    Official Full Name
    rotatinprovided by VGNC
    Primary source
    VGNC:VGNC:34211
    See related
    BGD:BT21385; EnsemblRapid:ENSBTAG00070021107
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See RTTN in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    49
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 24 NC_037351.1 (7121368..7239738)

    Chromosome 24 - NC_037351.1Genomic Context describing neighboring genes Neighboring gene suppressor of cytokine signaling 6 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene CD226 molecule Neighboring gene uncharacterized LOC101907606 Neighboring gene docking protein 6

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037351.1 Chromosome 24 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General gene information

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in centriole replication IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in centriole-centriole cohesion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in ciliary basal body organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206207.1NP_001193136.1  rotatin

      See identical proteins and their annotated locations for NP_001193136.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000024
      Conserved Domains (1) summary
      pfam14726
      Location:16112
      RTTN_N; Rotatin, an armadillo repeat protein, centriole functioning

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037351.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      7121368..7239738
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005224039.5XP_005224096.1  rotatin isoform X1

      UniProtKB/TrEMBL
      E1BG09
      Related
      ENSBTAP00070028512.1, ENSBTAT00070047650.1
      Conserved Domains (1) summary
      pfam14726
      Location:16112
      RTTN_N; Rotatin, an armadillo repeat protein, centriole functioning
    2. XM_059880993.1XP_059736976.1  rotatin isoform X2

    RNA

    1. XR_003032362.2 RNA Sequence