U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RPP38 ribonuclease P/MRP subunit p38 [ Bos taurus (domestic cattle) ]

    Gene ID: 511723, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RPP38provided by VGNC
    Official Full Name
    ribonuclease P/MRP subunit p38provided by VGNC
    Primary source
    VGNC:VGNC:34124
    See related
    BGD:BT12590; Ensembl:ENSBTAG00000063884
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RPP38 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (29665634..29680263)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene oleoyl-ACP hydrolase Neighboring gene acyl-CoA binding domain containing 7 Neighboring gene N-myristoyltransferase 2 Neighboring gene family with sequence similarity 171 member A1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC134596

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ribonuclease P RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonuclease P activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA 5'-leader removal IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in fibrillar center IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nucleolar ribonuclease P complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonuclease MRP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ribonuclease P protein subunit p38
    Names
    RNaseP protein p38
    ribonuclease P/MRP 38 subunit
    ribonuclease P/MRP 38kDa subunit
    NP_001033174.1
    XP_005214241.1
    XP_005214243.1
    XP_010809412.1
    XP_059748517.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038085.2 → NP_001033174.1  ribonuclease P protein subunit p38

      See identical proteins and their annotated locations for NP_001033174.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109652
      UniProtKB/Swiss-Prot
      Q32LC1
      Related
      ENSBTAP00000010127.4, ENSBTAT00000010127.6
      Conserved Domains (1) summary
      pfam01248
      Location:111 → 185
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      29665634..29680263
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892534.1 → XP_059748517.1  ribonuclease P protein subunit p38 isoform X1

      UniProtKB/Swiss-Prot
      G5E591, Q32LC1

    2. XM_005214184.5 → XP_005214241.1  ribonuclease P protein subunit p38 isoform X1

      See identical proteins and their annotated locations for XP_005214241.1

      UniProtKB/Swiss-Prot
      G5E591, Q32LC1
      Related
      ENSBTAP00000076188.1, ENSBTAT00000090302.1
      Conserved Domains (1) summary
      pfam01248
      Location:111 → 185
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

    3. XM_005214186.3 → XP_005214243.1  ribonuclease P protein subunit p38 isoform X1

      See identical proteins and their annotated locations for XP_005214243.1

      UniProtKB/Swiss-Prot
      G5E591, Q32LC1
      Related
      ENSBTAP00000086692.1, ENSBTAT00000099014.1
      Conserved Domains (1) summary
      pfam01248
      Location:111 → 185
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

    4. XM_010811110.4 → XP_010809412.1  ribonuclease P protein subunit p38 isoform X1

      See identical proteins and their annotated locations for XP_010809412.1

      UniProtKB/Swiss-Prot
      G5E591, Q32LC1
      Conserved Domains (1) summary
      pfam01248
      Location:111 → 185
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32LC1.2 GenPept UniProtKB/Swiss-Prot:Q32LC1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.