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    AP4M1 adaptor related protein complex 4 subunit mu 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 768040, updated on 1-Jan-2025

    Summary

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    Official Symbol
    AP4M1provided by VGNC
    Official Full Name
    adaptor related protein complex 4 subunit mu 1provided by VGNC
    Primary source
    VGNC:VGNC:25993
    See related
    BGD:BT16832; Ensembl:ENSBTAG00000002881
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See AP4M1 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (36345254..36349113, complement)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene canopy FGF signaling regulator 4 Neighboring gene TATA-box binding protein associated factor 6 Neighboring gene minichromosome maintenance complex component 7 Neighboring gene microRNA mir-106b Neighboring gene microRNA mir-93

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC137860

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to lysosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein targeting IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of clathrin adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-4 complex subunit mu-1
    Names
    AP-4 adapter complex mu subunit
    AP-4 adaptor complex mu subunit
    adapter-related protein complex 4 mu-1 subunit
    adapter-related protein complex 4 subunit mu-1
    adaptor related protein complex 4 mu 1 subunit
    mu subunit of AP-4
    mu-ARP2
    mu-adaptin-related protein 2
    mu4
    mu4-adaptin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077099.1 → NP_001070567.1  AP-4 complex subunit mu-1

      See identical proteins and their annotated locations for NP_001070567.1

      Status: PROVISIONAL

      Source sequence(s)
      BC113334
      UniProtKB/Swiss-Prot
      Q29RY8
      UniProtKB/TrEMBL
      A0A452DHX6
      Related
      ENSBTAP00000003736.4, ENSBTAT00000003736.5
      Conserved Domains (2) summary
      cd09253
      Location:175 → 452
      AP-4_Mu4_Cterm; C-terminal domain of medium Mu4 subunit in adaptor protein (AP) complex AP-4
      cd14838
      Location:3 → 141
      AP4_Mu_N; AP-4 complex subunit mu N-terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      36345254..36349113 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q29RY8.1 GenPept UniProtKB/Swiss-Prot:Q29RY8

    Gene LinkOut

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