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    PLSCR4 phospholipid scramblase 4 [ Bos taurus (domestic cattle) ]

    Gene ID: 539290, updated on 30-Jan-2025

    Summary

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    Official Symbol
    PLSCR4provided by VGNC
    Official Full Name
    phospholipid scramblase 4provided by VGNC
    Primary source
    VGNC:VGNC:33053
    See related
    BGD:BT13500; EnsemblRapid:ENSBTAG00070001634
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

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    See PLSCR4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (122257891..122300148)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene phospholipid scramblase 1 Neighboring gene phospholipid scramblase 4-like Neighboring gene beta-galactoside alpha-2,6-sialyltransferase 1 pseudogene Neighboring gene procollagen-lysine,2-oxoglutarate 5-dioxygenase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC148451

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phospholipid scramblase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in plasma membrane phospholipid scrambling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phospholipid scramblase 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081732.1 → NP_001075201.1  phospholipid scramblase 4

      See identical proteins and their annotated locations for NP_001075201.1

      Status: PROVISIONAL

      Source sequence(s)
      BC133592
      UniProtKB/TrEMBL
      A2VE63, F6RER6
      Related
      ENSBTAP00070002124.1, ENSBTAT00070003786.1
      Conserved Domains (1) summary
      pfam03803
      Location:100 → 322
      Scramblase; Scramblase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      122257891..122300148
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005201815.5 → XP_005201872.1  phospholipid scramblase 4 isoform X1

      See identical proteins and their annotated locations for XP_005201872.1

      UniProtKB/TrEMBL
      A2VE63, F6RER6
      Conserved Domains (1) summary
      pfam03803
      Location:100 → 322
      Scramblase; Scramblase

    2. XM_005201814.5 → XP_005201871.1  phospholipid scramblase 4 isoform X1

      See identical proteins and their annotated locations for XP_005201871.1

      UniProtKB/TrEMBL
      A2VE63, F6RER6
      Conserved Domains (1) summary
      pfam03803
      Location:100 → 322
      Scramblase; Scramblase

    3. XM_059885830.1 → XP_059741813.1  phospholipid scramblase 4 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MPD1
    Nucleotide Protein Strain
    Heading Accession and Version

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