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    PUS7L pseudouridine synthase 7 like [ Bos taurus (domestic cattle) ]

    Gene ID: 505464, updated on 30-Jan-2025

    Summary

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    Official Symbol
    PUS7Lprovided by VGNC
    Official Full Name
    pseudouridine synthase 7 likeprovided by VGNC
    Primary source
    VGNC:VGNC:33577
    See related
    BGD:BT22473; EnsemblRapid:ENSBTAG00070005098
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PUS7L in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (36708177..36731621)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 117 Neighboring gene twinfilin actin binding protein 1 Neighboring gene interleukin 1 receptor associated kinase 4 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 20 Neighboring gene dnaJ homolog subfamily A member 3, mitochondrial-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pseudouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pseudouridylate synthase PUS7L
    Names
    CG6745-like
    pseudouridylate synthase 7 homolog-like
    pseudouridylate synthase 7 like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205568.3 → NP_001192497.2  pseudouridylate synthase PUS7L

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000005
      UniProtKB/TrEMBL
      E1BGT6
      Conserved Domains (2) summary
      cd02576
      Location:299 → 698
      PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
      cl00130
      Location:22 → 47
      PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      36708177..36731621
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005206413.5 → XP_005206470.1  pseudouridylate synthase PUS7L isoform X1

      See identical proteins and their annotated locations for XP_005206470.1

      UniProtKB/TrEMBL
      E1BGT6
      Conserved Domains (2) summary
      cd02576
      Location:299 → 698
      PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
      cl00130
      Location:22 → 47
      PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)

    2. XM_005206415.5 → XP_005206472.1  pseudouridylate synthase PUS7L isoform X1

      See identical proteins and their annotated locations for XP_005206472.1

      UniProtKB/TrEMBL
      E1BGT6
      Related
      ENSBTAP00070006601.1, ENSBTAT00070011675.1
      Conserved Domains (2) summary
      cd02576
      Location:299 → 698
      PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
      cl00130
      Location:22 → 47
      PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)

    3. XM_005206414.5 → XP_005206471.1  pseudouridylate synthase PUS7L isoform X1

      See identical proteins and their annotated locations for XP_005206471.1

      UniProtKB/TrEMBL
      E1BGT6
      Conserved Domains (2) summary
      cd02576
      Location:299 → 698
      PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
      cl00130
      Location:22 → 47
      PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
    Nucleotide Protein Strain
    Heading Accession and Version

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