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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001271797.2 → NP_001258726.1 RING finger and CHY zinc finger domain-containing protein 1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC165433
- Consensus CDS
-
CCDS71613.1
- UniProtKB/TrEMBL
- G3UWD8, Q8R593
- Related
- ENSMUSP00000131270.2, ENSMUST00000169948.2
- Conserved Domains (2) summary
-
- pfam13639
Location:104 → 146
- zf-RING_2; Ring finger domain
- pfam14599
Location:151 → 209
- zinc_ribbon_6; Zinc-ribbon
-
NM_001421216.1 → NP_001408145.1 RING finger and CHY zinc finger domain-containing protein 1 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC165433
-
NM_026557.5 → NP_080833.1 RING finger and CHY zinc finger domain-containing protein 1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC165433
- Consensus CDS
-
CCDS19424.1
- UniProtKB/Swiss-Prot
- Q920H0, Q9CR50
- UniProtKB/TrEMBL
-
Q8R593
- Related
- ENSMUSP00000031345.9, ENSMUST00000031345.15
- Conserved Domains (3) summary
-
- pfam05495
Location:20 → 93
- zf-CHY; CHY zinc finger
- pfam13639
Location:144 → 186
- zf-RING_2; Ring finger domain
- pfam14599
Location:191 → 249
- zinc_ribbon_6; Zinc-ribbon
RNA
-
NR_073442.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' exon structure, compared to variant 1. This variant is represented as non-coding because it lacks a large portion of the coding region, including the translational start codon, found in variant 1.
- Source sequence(s)
-
AK015870, AK018488, AK078397
- Related
-
ENSMUST00000140670.8
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
92096701..92110988 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)