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    Ppp1r27 protein phosphatase 1, regulatory subunit 27 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 287881, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ppp1r27provided by RGD
    Official Full Name
    protein phosphatase 1, regulatory subunit 27provided by RGD
    Primary source
    RGD:1308861
    See related
    EnsemblRapid:ENSRNOG00000036690 AllianceGenome:RGD:1308861
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Dysfip1; RGD1308861
    Summary
    Predicted to enable phosphatase binding activity. Orthologous to human PPP1R27 (protein phosphatase 1 regulatory subunit 27). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward (RPKM 1526.2) See more
    Orthologs
    NEW
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    Genomic context

    See Ppp1r27 in Genome Data Viewer
    Location:
    10q32.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (106326691..106327860, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (105828364..105829533, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (109727850..109729019, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103693493 Neighboring gene glucagon receptor Neighboring gene MAPK regulated co-repressor interacting protein 1 Neighboring gene dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 like 1 Neighboring gene prolyl 4-hydroxylase subunit beta Neighboring gene H/ACA ribonucleoprotein complex subunit 3 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    protein phosphatase 1 regulatory subunit 27
    Names
    dysferlin-interacting protein 1
    myosin-binding subunit 85

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105858.1NP_001099328.1  protein phosphatase 1 regulatory subunit 27

      See identical proteins and their annotated locations for NP_001099328.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473948
      UniProtKB/TrEMBL
      A6HLE7, D3ZXG0
      Related
      ENSRNOP00000051842.2, ENSRNOT00000054959.4
      Conserved Domains (2) summary
      sd00045
      Location:6394
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:38127
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      106326691..106327860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)