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    Nkapl NFKB activating protein-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 291165, updated on 9-Dec-2024

    Summary

    Official Symbol
    Nkaplprovided by RGD
    Official Full Name
    NFKB activating protein-likeprovided by RGD
    Primary source
    RGD:1311667
    See related
    EnsemblRapid:ENSRNOG00000056708 AllianceGenome:RGD:1311667
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311667
    Summary
    Predicted to enable chromatin binding activity. Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to human NKAPL (NFKB activating protein like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Nkapl in Genome Data Viewer
    Location:
    17p11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (47830828..47832345)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (43135096..43136613)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (45175254..45176771)

    Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 420, pseudogene 1 Neighboring gene uncharacterized LOC120097740 Neighboring gene zinc finger protein with KRAB and SCAN domains 4-like Neighboring gene zinc finger with KRAB and SCAN domains 4 Neighboring gene zinc finger and SCAN domain containing 26 Neighboring gene microRNA 1896 Neighboring gene uncharacterized LOC120097923 Neighboring gene piggyBac transposable element derived 1

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC114538

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of gene expression IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001029913.1NP_001025084.1  NKAP-like protein

      See identical proteins and their annotated locations for NP_001025084.1

      Status: PROVISIONAL

      Source sequence(s)
      BC097473
      UniProtKB/TrEMBL
      A6KN82, G3V9G8, Q4QR70
      Related
      ENSRNOP00000074151.1, ENSRNOT00000080417.3
      Conserved Domains (2) summary
      pfam06047
      Location:286387
      SynMuv_product; Ras-induced vulval development antagonizt
      pfam15692
      Location:110170
      NKAP; NF-kappa-B-activating protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086035.1 Reference GRCr8

      Range
      47830828..47832345
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)