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    Lhb luteinizing hormone beta [ Mus musculus (house mouse) ]

    Gene ID: 16866, updated on 27-Nov-2024

    Summary

    Official Symbol
    Lhbprovided by MGI
    Official Full Name
    luteinizing hormone betaprovided by MGI
    Primary source
    MGI:MGI:96782
    See related
    Ensembl:ENSMUSG00000100916 AllianceGenome:MGI:96782
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    LH; LH-B; LSH-B; Gm29035; LSH-beta
    Summary
    Predicted to enable hormone activity. Acts upstream of or within luteinizing hormone signaling pathway involved in ovarian follicle development. Located in cytoplasm. Is expressed in alimentary system; brain; genitourinary system; and heart. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 23 with or without anosmia. Orthologous to several human genes including LHB (luteinizing hormone subunit beta). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 15.7), lung adult (RPKM 7.4) and 1 other tissue See more
    Orthologs
    NEW
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    Genomic context

    See Lhb in Genome Data Viewer
    Location:
    7 B3; 7 29.3 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (45070370..45071278)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45417608..45421855)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene neurotrophin 5 Neighboring gene stabilizer of axonemal microtubules 3 Neighboring gene RuvB-like AAA ATPase 2 Neighboring gene STARR-positive B cell enhancer ABC_E349 Neighboring gene glycogen synthase 1, muscle Neighboring gene STARR-seq mESC enhancer starr_18840 Neighboring gene ferritin light polypeptide 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of pituitary gonadotropin complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    lutropin subunit beta
    Names
    leutropin
    luteinizing hormone subunit beta
    lutropin beta chain

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008497.2NP_032523.2  lutropin subunit beta precursor

      See identical proteins and their annotated locations for NP_032523.2

      Status: VALIDATED

      Source sequence(s)
      AV173269, BB618381, BM224915
      Consensus CDS
      CCDS21242.1
      UniProtKB/Swiss-Prot
      O09108, Q60844
      UniProtKB/TrEMBL
      G3X9G6
      Related
      ENSMUSP00000072276.5, ENSMUST00000072453.8
      Conserved Domains (1) summary
      smart00068
      Location:25131
      GHB; Glycoprotein hormone beta chain homologues

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      45070370..45071278
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)