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    Qrfp pyroglutamylated RFamide peptide [ Rattus norvegicus (Norway rat) ]

    Gene ID: 379044, updated on 14-Nov-2024

    Summary

    Official Symbol
    Qrfpprovided by RGD
    Official Full Name
    pyroglutamylated RFamide peptideprovided by RGD
    Primary source
    RGD:735020
    See related
    EnsemblRapid:ENSRNOG00000046473 AllianceGenome:RGD:735020
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    P518; 26RFa; NEWGENE_735020
    Summary
    Enables G protein-coupled receptor binding activity. Predicted to be involved in several processes, including grooming behavior; neuropeptide signaling pathway; and regulation of feeding behavior. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Qrfp in Genome Data Viewer
    Location:
    3p12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (35485579..35487902, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (15088045..15088419, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (9402397..9404354)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene exosome component 2 Neighboring gene ABL proto-oncogene 1, non-receptor tyrosine kinase Neighboring gene uncharacterized LOC134486069 Neighboring gene fibrinogen C domain containing 1 Neighboring gene uncharacterized LOC120101519

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables neuropeptide hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuropeptide hormone activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables orexigenic neuropeptide QRFP receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables orexigenic neuropeptide QRFP receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables orexigenic neuropeptide QRFP receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in grooming behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in grooming behavior ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in locomotory behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in locomotory behavior ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuropeptide signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuropeptide signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of blood pressure ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of feeding behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of feeding behavior ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    orexigenic neuropeptide QRFP
    Names
    P518 precursor protein
    neuropeptide

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198200.1NP_937843.1  orexigenic neuropeptide QRFP precursor

      See identical proteins and their annotated locations for NP_937843.1

      Status: PROVISIONAL

      Source sequence(s)
      AB109627
      UniProtKB/Swiss-Prot
      P83860
      Related
      ENSRNOP00000066916.1, ENSRNOT00000073731.4
      Conserved Domains (1) summary
      pfam11109
      Location:16124
      RFamide_26RFa; Orexigenic neuropeptide Qrfp/P518

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      35485579..35487902 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063284298.1XP_063140368.1  orexigenic neuropeptide QRFP isoform X1

      UniProtKB/TrEMBL
      A6JU31