U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    cenpp.L centromere protein P L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100137640, updated on 4-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    cenpp.L
    Official Full Name
    centromere protein P L homeolog
    Primary source
    Xenbase:XB-GENE-6256120
    Locus tag
    XELAEV_18023758mg
    See related
    EnsemblRapid:ENSXLAG00005034072 AllianceGenome:Xenbase:XB-GENE-6256120
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    cenpp; cenp-p
    Summary
    Predicted to act upstream of or within CENP-A containing chromatin assembly. Predicted to be located in chromosome, centromeric region. [provided by Alliance of Genome Resources, Jan 2025]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See cenpp.L in Genome Data Viewer
    Location:
    chromosome: 4L
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (122493016..122643591, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (117220302..117371203, complement)

    Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene ATR interacting protein L homeolog Neighboring gene Novel protein of BTG family L homeolog Neighboring gene inositol-pentakisphosphate 2-kinase L homeolog Neighboring gene extracellular matrix protein 2, female organ and adipocyte specific, gene 1 L homeolog Neighboring gene asporin L homeolog Neighboring gene osteomodulin L homeolog Neighboring gene osteoglycin L homeolog Neighboring gene nucleolar protein 8 L homeolog Neighboring gene uncharacterized LOC100487499 L homeolog Neighboring gene small nucleolar RNA SNORA84 Neighboring gene isoleucyl-tRNA synthetase 1 L homeolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within CENP-A containing chromatin assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Centromere protein P-like; uncharacterized protein LOC100137640

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001114789.1 → NP_001108261.1  Centromere protein P-like

      See identical proteins and their annotated locations for NP_001108261.1

      Status: PROVISIONAL

      Source sequence(s)
      BC157440
      UniProtKB/TrEMBL
      A0A974HPY3, A9ULX5
      Conserved Domains (1) summary
      pfam13096
      Location:106 → 281
      CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      122493016..122643591 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018256348.2 → XP_018111837.1  uncharacterized protein LOC100137640 isoform X3

      UniProtKB/TrEMBL
      A0A1L8GP36, A0A974HPD6
      Related
      ENSXLAP00005101731.1, ENSXLAT00005103718.1

    2. XM_041589080.1 → XP_041445014.1  uncharacterized protein LOC100137640 isoform X1

      UniProtKB/TrEMBL
      A0A8J1MT47
      Conserved Domains (1) summary
      pfam13096
      Location:125 → 319
      CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P

    3. XM_041589081.1 → XP_041445015.1  uncharacterized protein LOC100137640 isoform X2

      UniProtKB/TrEMBL
      A0A8J1MVF4
      Related
      ENSXLAP00005101763.1, ENSXLAT00005103750.1
      Conserved Domains (1) summary
      pfam13096
      Location:125 → 300
      CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.