U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    emp1.L epithelial membrane protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444747, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    emp1.L
    Official Full Name
    epithelial membrane protein 1 L homeolog
    Primary source
    Xenbase:XB-GENE-6078287
    Locus tag
    XELAEV_18023508mg
    See related
    EnsemblRapid:ENSXLAG00005013876 AllianceGenome:Xenbase:XB-GENE-6078287
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    emp1
    Summary
    Predicted to be located in membrane. Orthologous to human EMP1 (epithelial membrane protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See emp1.L in Genome Data Viewer
    Location:
    chromosome: 4L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (111045274..111065180, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (105793717..105813680, complement)

    Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 234 member B L homeolog Neighboring gene coagulation factor VIII L homeolog Neighboring gene germ cell associated 1 L homeolog Neighboring gene uncharacterized LOC108714460 Neighboring gene glutamate receptor, ionotropic, N-methyl D-aspartate 2B L homeolog Neighboring gene uncharacterized LOC121403086

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC84779

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    epithelial membrane protein 1 L homeolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092849.1 → NP_001086318.1  epithelial membrane protein 1 L homeolog

      See identical proteins and their annotated locations for NP_001086318.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074477
      UniProtKB/TrEMBL
      A0A974D6R7, Q6DKA3
      Related
      ENSXLAP00005041013.1, ENSXLAT00005041938.1
      Conserved Domains (1) summary
      cl21598
      Location:1 → 157
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      111045274..111065180 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.