slc20a1.S solute carrier family 20 member 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: slc20a1.S
Official Full Name: solute carrier family 20 member 1 S homeolog
Primary source: Xenbase:XB-GENE-6254012
Locus tag: XELAEV_18020280mg
See related: EnsemblRapid:ENSXLAG00005016784 AllianceGenome:Xenbase:XB-GENE-6254012
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: pit1; Glvr-1; xSLC20A1; slc20a1-a; slc20a1-b
Summary: Predicted to enable phosphate transmembrane transporter activity and symporter activity. Predicted to act upstream of or within phosphate ion transport. Predicted to be located in membrane. Orthologous to human SLC20A1 (solute carrier family 20 member 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: chromosome: 3S

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3S	NC_054376.1 (27242604..27267786, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3S	NC_030729.1 (26168733..26194341, complement)

Chromosome 3S - NC_054376.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables phosphate transmembrane transporter activity	IEA Inferred from Electronic Annotation more info
enables symporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within phosphate ion transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: sodium-dependent phosphate transporter 1-A

Names: solute carrier family 20 (phosphate transporter), member 1 S homeolog; solute carrier family 20 member 1-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094025.1 → NP_001087494.1 sodium-dependent phosphate transporter 1-A

See identical proteins and their annotated locations for NP_001087494.1

Status: PROVISIONAL

Source sequence(s)

BC080010

UniProtKB/Swiss-Prot

Q68F35

UniProtKB/TrEMBL

A0A974HQV7

Related

ENSXLAP00005049402.1, ENSXLAT00005050543.1

Conserved Domains (2) summary

COG0306
Location:509 → 679

PitA; Phosphate/sulfate permease [Inorganic ion transport and metabolism]

pfam01384
Location:572 → 670

PHO4; Phosphate transporter family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

27242604..27267786 complement

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GenBank, FASTA, Sequence Viewer (Graphics)