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    cyp4b1.5.L cytochrome P450 family 4 subfamily B member 1 gene 5 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100036876, updated on 27-Dec-2024

    Summary

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    Symbol
    cyp4b1.5.L
    Full Name
    cytochrome P450 family 4 subfamily B member 1 gene 5 L homeolog
    Primary source
    Xenbase:XB-GENE-6465965
    Locus tag
    XELAEV_18023137mg
    See related
    AllianceGenome:Xenbase:XB-GENE-6465965
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    CYP4T7; XB5810926; XB5810926.L; LOC100488227.L
    Summary
    Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human CYP4B1 (cytochrome P450 family 4 subfamily B member 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See cyp4b1.5.L in Genome Data Viewer
    Location:
    chromosome: 4L
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (88915472..88929631)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (83619332..83633491)

    Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 4 subfamily B member 1 gene 3 L homeolog Neighboring gene cytochrome P450 family 4 subfamily B member 1 gene 4 L homeolog Neighboring gene cytochrome P450 family 4 subfamily B member 1 gene 6 L homeolog Neighboring gene pdzk1 interacting protein 1 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of multiple cytochrome P450 genes belonging to the CYP4 family in Xenopus laevis: cDNA cloning of CYP4F42 and CYP4V4. Fujita Y, et al. Comp Biochem Physiol B Biochem Mol Biol, 2004 Jun. PMID 15193267
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC100036876
    Names
    cytochrome P450 4B1-like L homeolog
    provisional ortholog of cytochrome P450 family 4 subfamily B member 1 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097657.1 → NP_001091126.1  uncharacterized protein LOC100036876

      See identical proteins and their annotated locations for NP_001091126.1

      Status: PREDICTED

      Source sequence(s)
      BC129577
      UniProtKB/TrEMBL
      A0A974HPE8, A1L2K6
      Conserved Domains (1) summary
      pfam00067
      Location:48 → 502
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      88915472..88929631
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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