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    decr2.L 2,4-dienoyl-CoA reductase 2 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 443792, updated on 4-Jan-2025

    Summary

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    Official Symbol
    decr2.L
    Official Full Name
    2,4-dienoyl-CoA reductase 2 L homeolog
    Primary source
    Xenbase:XB-GENE-5949603
    See related
    AllianceGenome:Xenbase:XB-GENE-5949603
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    decr2
    Summary
    Predicted to enable 2,4-dienoyl-CoA reductase (NADPH) activity. Predicted to act upstream of or within fatty acid catabolic process. Orthologous to human DECR2 (2,4-dienoyl-CoA reductase 2). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See decr2.L in Genome Data Viewer
    Location:
    chromosome: 9_10L
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (116169029..116184763, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (105566097..105581917, complement)

    Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene calpain 15 L homeolog Neighboring gene RAB11 family interacting protein 3 (class II) L homeolog Neighboring gene NME/NM23 nucleoside diphosphate kinase 4 L homeolog Neighboring gene exportin 6 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC82265

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables 2,4-dienoyl-CoA reductase (NADPH) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within fatty acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    2,4-dienoyl-CoA reductase 2 L homeolog
    Names
    2,4-dienoyl CoA reductase 2, peroxisomal
    2,4-dienoyl-CoA reductase 2, peroxisomal L homeolog
    NP_001085366.1
    XP_018089788.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001091897.1 → NP_001085366.1  2,4-dienoyl-CoA reductase 2 L homeolog

      See identical proteins and their annotated locations for NP_001085366.1

      Status: PROVISIONAL

      Source sequence(s)
      BC071136
      UniProtKB/TrEMBL
      Q6GR01
      Conserved Domains (2) summary
      cd05369
      Location:34 → 281
      TER_DECR_SDR_a; Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR
      PRK07576
      Location:34 → 281
      PRK07576; short chain dehydrogenase; Provisional

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      116169029..116184763 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018234299.2 → XP_018089788.1  2,4-dienoyl-CoA reductase 2 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J0TJC8
    Nucleotide Protein Strain
    Heading Accession and Version

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