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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008924.2 RefSeqGene
- Range
-
5551..12212
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001006941.2 → NP_001006942.1 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and the 5' coding region, compared to variant 1. The resulting isoform (d) has a shorter and distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AK289361, AW297350, BX339649, CX761434
- Consensus CDS
-
CCDS46967.1
- UniProtKB/TrEMBL
-
C9J7S5
- Related
- ENSP00000402744.2, ENST00000445626.6
- Conserved Domains (1) summary
-
- pfam05208
Location:19 → 358
- ALG3; ALG3 protein
-
NM_005787.6 → NP_005778.1 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AC061705, AW297350, BC002839, BC004313, BC021062, Y09022
- Consensus CDS
-
CCDS46968.1
- UniProtKB/Swiss-Prot
- A8JZZ6, Q92685, Q9BT71
- UniProtKB/TrEMBL
-
C9J7S5
- Related
- ENSP00000380793.3, ENST00000397676.8
- Conserved Domains (1) summary
-
- pfam05208
Location:48 → 406
- ALG3; ALG3 protein
RNA
-
NR_024533.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an exon in the 5' coding region resulting in a frameshift and early stop codon, compared to variant 1. The predicted protein is not represented because the product is significantly truncated and the transcript is a candidate for nonsense-mediated decay (NMD).
- Source sequence(s)
-
AC061705, AK299575, AW297350, Y09022
- Related
-
ENST00000411922.5
-
NR_024534.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' coding region resulting in a frameshift and early stop codon, compared to variant 1. The predicted protein is not represented because the product is significantly truncated and the transcript is a candidate for nonsense-mediated decay (NMD).
- Source sequence(s)
-
AW297350, BC004313, BM920198, Y09022
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
184242301..184249525 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
187051585..187058813 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001006940.1: Suppressed sequence
- Description
- NM_001006940.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.