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    CCDC51 coiled-coil domain containing 51 [ Bos taurus (domestic cattle) ]

    Gene ID: 517515, updated on 30-Jan-2025

    Summary

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    Official Symbol
    CCDC51provided by VGNC
    Official Full Name
    coiled-coil domain containing 51provided by VGNC
    Primary source
    VGNC:VGNC:26899
    See related
    BGD:BT10739; EnsemblRapid:ENSBTAG00070030776
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MITOK
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC51 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (51423606..51432980)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene three prime repair exonuclease 1 Neighboring gene ATR interacting protein Neighboring gene translation machinery associated 7 homolog Neighboring gene large ribosomal subunit protein eL36-like Neighboring gene plexin B1 Neighboring gene serine peptidase inhibitor Kazal type 8 (putative)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    mitochondrial potassium channel
    Names
    coiled-coil domain-containing protein 51

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001015619.1 → NP_001015619.1  mitochondrial potassium channel

      See identical proteins and their annotated locations for NP_001015619.1

      Status: PROVISIONAL

      Source sequence(s)
      BT020853
      UniProtKB/Swiss-Prot
      A6QQF9, Q5E9Q3, Q5E9W7, Q5EA69
      UniProtKB/TrEMBL
      A0AAF6ZWN5
      Related
      ENSBTAP00070042411.1, ENSBTAT00070069657.1
      Conserved Domains (1) summary
      TIGR02169
      Location:107 → 329
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      51423606..51432980
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059879661.1 → XP_059735644.1  mitochondrial potassium channel isoform X1

      UniProtKB/Swiss-Prot
      A6QQF9, Q5E9Q3, Q5E9W7, Q5EA69
      UniProtKB/TrEMBL
      A0AAF6ZWN5

    2. XM_059879662.1 → XP_059735645.1  mitochondrial potassium channel isoform X1

      UniProtKB/Swiss-Prot
      A6QQF9, Q5E9Q3, Q5E9W7, Q5EA69
      UniProtKB/TrEMBL
      A0AAF6ZWN5

    3. XM_010817730.4 → XP_010816032.1  mitochondrial potassium channel isoform X2

      See identical proteins and their annotated locations for XP_010816032.1

      Conserved Domains (1) summary
      cl25732
      Location:3 → 225
      SMC_N; RecF/RecN/SMC N terminal domain

    4. XM_005222829.5 → XP_005222886.1  mitochondrial potassium channel isoform X1

      See identical proteins and their annotated locations for XP_005222886.1

      UniProtKB/Swiss-Prot
      A6QQF9, Q5E9Q3, Q5E9W7, Q5EA69
      UniProtKB/TrEMBL
      A0AAF6ZWN5
      Conserved Domains (1) summary
      TIGR02169
      Location:107 → 329
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    5. XM_005222832.5 → XP_005222889.1  mitochondrial potassium channel isoform X2

      See identical proteins and their annotated locations for XP_005222889.1

      Conserved Domains (1) summary
      cl25732
      Location:3 → 225
      SMC_N; RecF/RecN/SMC N terminal domain

    6. XM_010817729.4 → XP_010816031.1  mitochondrial potassium channel isoform X1

      See identical proteins and their annotated locations for XP_010816031.1

      UniProtKB/Swiss-Prot
      A6QQF9, Q5E9Q3, Q5E9W7, Q5EA69
      UniProtKB/TrEMBL
      A0AAF6ZWN5
      Conserved Domains (1) summary
      TIGR02169
      Location:107 → 329
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    7. XM_005222830.5 → XP_005222887.1  mitochondrial potassium channel isoform X1

      See identical proteins and their annotated locations for XP_005222887.1

      UniProtKB/Swiss-Prot
      A6QQF9, Q5E9Q3, Q5E9W7, Q5EA69
      UniProtKB/TrEMBL
      A0AAF6ZWN5
      Conserved Domains (1) summary
      TIGR02169
      Location:107 → 329
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5E9Q3.1 GenPept UniProtKB/Swiss-Prot:Q5E9Q3

    Gene LinkOut

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