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    SFXN3 sideroflexin 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 511755, updated on 29-Jan-2025

    Summary

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    Official Symbol
    SFXN3provided by VGNC
    Official Full Name
    sideroflexin 3provided by VGNC
    Primary source
    VGNC:VGNC:34532
    See related
    BGD:BT19833; Ensembl:ENSBTAG00000005015
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SFXN3 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (21863763..21887416)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene myosin IC heavy chain Neighboring gene leucine zipper tumor suppressor 2 Neighboring gene PDZ domain containing 7 Neighboring gene Kazal type serine peptidase inhibitor domain 1 Neighboring gene T cell leukemia homeobox 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. The small GTPase RAB28 is required for phagocytosis of cone outer segments by the murine retinal pigmented epithelium. Ying G, et al. J Biol Chem, 2018 Nov 9. PMID 30228185, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC155034

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in serine import into mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sideroflexin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101946.1 → NP_001095416.1  sideroflexin-3

      See identical proteins and their annotated locations for NP_001095416.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149158
      UniProtKB/Swiss-Prot
      A6QP55
      UniProtKB/TrEMBL
      A0AAA9TWW9
      Conserved Domains (1) summary
      pfam03820
      Location:15 → 321
      Mtc; Tricarboxylate carrier

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      21863763..21887416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059881822.1 → XP_059737805.1  sideroflexin-3 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1M2J8

    2. XM_059881821.1 → XP_059737804.1  sideroflexin-3 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TWW9, A0AAF6YNB0
      Related
      ENSBTAP00070016021.1, ENSBTAT00070026904.1

    3. XM_059881820.1 → XP_059737803.1  sideroflexin-3 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TWW9, A0AAF6YNB0
      Related
      ENSBTAP00070016038.1, ENSBTAT00070026930.1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A6QP55.1 GenPept UniProtKB/Swiss-Prot:A6QP55

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials