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    SRP9 signal recognition particle 9 [ Bos taurus (domestic cattle) ]

    Gene ID: 527129, updated on 27-Dec-2024

    Summary

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    Official Symbol
    SRP9provided by VGNC
    Official Full Name
    signal recognition particle 9provided by VGNC
    Primary source
    VGNC:VGNC:35288
    See related
    Ensembl:ENSBTAG00000033322
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SRP9 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (28800000..28810711)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene ENAH actin regulator Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene epoxide hydrolase 1 Neighboring gene transmembrane protein 63A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC137075

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 7S RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of signal recognition particle, endoplasmic reticulum targeting IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    signal recognition particle 9 kDa protein
    Names
    signal recognition particle 9kD
    NP_001108555.1
    XP_005216877.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001115083.2 → NP_001108555.1  signal recognition particle 9 kDa protein

      Status: PROVISIONAL

      Source sequence(s)
      BC111640
      UniProtKB/TrEMBL
      Q2NKU2
      Related
      ENSBTAP00000044592.1, ENSBTAT00000047381.2
      Conserved Domains (1) summary
      pfam05486
      Location:4 → 50
      SRP9-21; Signal recognition particle 9 kDa protein (SRP9)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      28800000..28810711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005216820.5 → XP_005216877.1  signal recognition particle 9 kDa protein isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LYQ7
      Related
      ENSBTAP00000065911.1, ENSBTAT00000076619.2
      Conserved Domains (1) summary
      pfam05486
      Location:4 → 73
      SRP9-21; Signal recognition particle 9 kDa protein (SRP9)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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