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    SDR39U1 short chain dehydrogenase/reductase family 39U member 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 520897, updated on 27-Dec-2024

    Summary

    Official Symbol
    SDR39U1provided by VGNC
    Official Full Name
    short chain dehydrogenase/reductase family 39U member 1provided by VGNC
    Primary source
    VGNC:VGNC:34396
    See related
    BGD:BT20956; Ensembl:ENSBTAG00000004788
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C14orf124; C10H14orf124
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See SDR39U1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (20731347..20734733)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346344 Neighboring gene TBC1 domain family member 21 Neighboring gene uncharacterized LOC104973073 Neighboring gene KH and NYN domain containing Neighboring gene cerebellin 3 precursor

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    epimerase family protein SDR39U1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075812.2NP_001069280.1  epimerase family protein SDR39U1

      See identical proteins and their annotated locations for NP_001069280.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118349
      UniProtKB/Swiss-Prot
      Q17QH8
      UniProtKB/TrEMBL
      F1MK41
      Related
      ENSBTAP00000044527.2, ENSBTAT00000047311.3
      Conserved Domains (2) summary
      cd05242
      Location:2293
      SDR_a8; atypical (a) SDRs, subgroup 8
      TIGR01777
      Location:3289
      yfcH; TIGR01777 family protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      20731347..20734733
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010808949.4XP_010807251.1  epimerase family protein SDR39U1 isoform X2

      See identical proteins and their annotated locations for XP_010807251.1

      UniProtKB/TrEMBL
      A0AAA9S1A5
      Related
      ENSBTAP00000077455.1, ENSBTAT00000132634.1
      Conserved Domains (1) summary
      cl25409
      Location:26211
      SDR; Short-chain dehydrogenases/reductases (SDR)
    2. XM_010808948.4XP_010807250.1  epimerase family protein SDR39U1 isoform X1

      See identical proteins and their annotated locations for XP_010807250.1

      Conserved Domains (1) summary
      cl25409
      Location:12195
      SDR; Short-chain dehydrogenases/reductases (SDR)