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    MCRS1 microspherule protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 514410, updated on 27-Dec-2024

    Summary

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    Official Symbol
    MCRS1provided by VGNC
    Official Full Name
    microspherule protein 1provided by VGNC
    Primary source
    VGNC:VGNC:31323
    See related
    BGD:BT22852; Ensembl:ENSBTAG00000019281
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See MCRS1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (30264899..30274172)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene pre-mRNA processing factor 40 homolog B Neighboring gene family with sequence similarity 186 member B Neighboring gene potassium voltage-gated channel subfamily H member 3 Neighboring gene spermatogenesis associated serine rich 2 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene transfer RNA glycine (anticodon CCC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC139523

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G-quadruplex RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of MLL1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of NSL complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    microspherule protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075666.1 → NP_001069134.1  microspherule protein 1

      See identical proteins and their annotated locations for NP_001069134.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123429
      UniProtKB/TrEMBL
      A0A3Q1NG02, Q08E44
      Related
      ENSBTAP00000043553.2, ENSBTAT00000046234.3
      Conserved Domains (2) summary
      cd00060
      Location:345 → 445
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:134 → 331
      MCRS_N; N-terminal region of micro-spherule protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      30264899..30274172
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005206296.4 → XP_005206353.1  microspherule protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005206353.1

      UniProtKB/TrEMBL
      A0A3Q1NG02
      Related
      ENSBTAP00000070672.2, ENSBTAT00000074497.2
      Conserved Domains (2) summary
      cd00060
      Location:332 → 432
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:121 → 318
      MCRS_N; N-terminal region of micro-spherule protein

    2. XM_059886346.1 → XP_059742329.1  microspherule protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NG02

    RNA

    1. XR_806617.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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