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    SETD7 SET domain containing 7, histone lysine methyltransferase [ Bos taurus (domestic cattle) ]

    Gene ID: 515928, updated on 1-Jan-2025

    Summary

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    Official Symbol
    SETD7provided by VGNC
    Official Full Name
    SET domain containing 7, histone lysine methyltransferaseprovided by VGNC
    Primary source
    VGNC:VGNC:34497
    See related
    Ensembl:ENSBTAG00000003581
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SETD7-1; SETD7-2
    Orthologs
    human mouse all
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    Genomic context

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    See SETD7 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (18156202..18212821)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104974584 Neighboring gene mastermind like transcriptional coactivator 3 Neighboring gene ribosomal biogenesis factor-like Neighboring gene microsomal glutathione S-transferase 2 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene large ribosomal subunit protein eL33-like Neighboring gene uncharacterized LOC100848703 Neighboring gene RAB33B, member RAS oncogene family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K4 monomethyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heterochromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-lysine monomethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-lysine N-methyltransferase SETD7
    Names
    KIAA1717-like protein
    SET domain containing 7, lysine methyltransferase
    SET domain containing lysine methyltransferase 7
    XP_005217639.2
    XP_059732240.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      18156202..18212821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005217582.5 → XP_005217639.2  histone-lysine N-methyltransferase SETD7 isoform X1

      UniProtKB/TrEMBL
      D5KB41, F1MUT0
      Related
      ENSBTAP00000004658.4, ENSBTAT00000004658.6

    2. XM_059876257.1 → XP_059732240.1  histone-lysine N-methyltransferase SETD7 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials