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    LMBR1 limb development membrane protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 519337, updated on 29-Jan-2025

    Summary

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    Official Symbol
    LMBR1provided by VGNC
    Official Full Name
    limb development membrane protein 1provided by VGNC
    Primary source
    VGNC:VGNC:30922
    See related
    BGD:BT13731; Ensembl:ENSBTAG00000030817
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See LMBR1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 4 NC_037331.1 (118163990..118296911, complement)

    Chromosome 4 - NC_037331.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112446461 Neighboring gene uncharacterized LOC132345160 Neighboring gene ring finger protein 32 Neighboring gene uncharacterized LOC112446462 Neighboring gene microRNA mir-11984 Neighboring gene nucleolar protein with MIF4G domain 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    limb region 1 protein homolog
    Names
    limb region 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075786.3 → NP_001069254.2  limb region 1 protein homolog

      Status: VALIDATED

      Source sequence(s)
      NKLS02000004
      UniProtKB/TrEMBL
      A0AAA9TXI9, F1MNF0
      Related
      ENSBTAP00070023796.1, ENSBTAT00070040239.1
      Conserved Domains (1) summary
      pfam04791
      Location:26 → 445
      LMBR1; LMBR1-like membrane protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037331.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      118163990..118296911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024990682.2 → XP_024846450.1  limb region 1 protein homolog isoform X2

      UniProtKB/TrEMBL
      A0AAA9TP21
      Related
      ENSBTAP00070023793.1, ENSBTAT00070040236.1
      Conserved Domains (1) summary
      pfam04791
      Location:19 → 410
      LMBR1; LMBR1-like membrane protein

    2. XM_059885581.1 → XP_059741564.1  limb region 1 protein homolog isoform X4

    3. XM_059885582.1 → XP_059741565.1  limb region 1 protein homolog isoform X6

    4. XM_059885583.1 → XP_059741566.1  limb region 1 protein homolog isoform X6

    5. XM_024990684.2 → XP_024846452.1  limb region 1 protein homolog isoform X5

      Conserved Domains (1) summary
      pfam04791
      Location:146 → 310
      LMBR1; LMBR1-like membrane protein

    6. XM_024990680.2 → XP_024846448.1  limb region 1 protein homolog isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LXM8, A0AAA9TXI9
      Related
      ENSBTAP00070023776.1, ENSBTAT00070040219.1
      Conserved Domains (1) summary
      pfam04791
      Location:19 → 450
      LMBR1; LMBR1-like membrane protein

    7. XM_059885580.1 → XP_059741563.1  limb region 1 protein homolog isoform X3

      UniProtKB/TrEMBL
      A0AAA9TP21
      Related
      ENSBTAP00070023759.1, ENSBTAT00070040203.1
    Nucleotide Protein Strain
    Heading Accession and Version

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