U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CCDC120 coiled-coil domain containing 120 [ Bos taurus (domestic cattle) ]

    Gene ID: 508704, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CCDC120provided by VGNC
    Official Full Name
    coiled-coil domain containing 120provided by VGNC
    Primary source
    VGNC:VGNC:26839
    See related
    BGD:BT27525; Ensembl:ENSBTAG00000002561
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CCDC120 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (87136476..87152941)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112445237 Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene transcription factor binding to IGHM enhancer 3 Neighboring gene PRA1 domain family member 2 Neighboring gene WD repeat domain 45

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC166385

    General protein information

    Go to the top of the page Help
    Preferred Names
    coiled-coil domain-containing protein 120

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101906.1 → NP_001095376.1  coiled-coil domain-containing protein 120

      See identical proteins and their annotated locations for NP_001095376.1

      Status: PROVISIONAL

      Source sequence(s)
      BC150087
      UniProtKB/TrEMBL
      A6QR27, F1MMM7
      Related
      ENSBTAP00000003317.5, ENSBTAT00000003317.6
      Conserved Domains (1) summary
      pfam11819
      Location:8 → 135
      DUF3338; Domain of unknown function (DUF3338)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      87136476..87152941
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024987841.2 → XP_024843609.1  coiled-coil domain-containing protein 120 isoform X2

      Conserved Domains (1) summary
      pfam11819
      Location:2 → 139
      DUF3338; Domain of unknown function (DUF3338)

    2. XM_024987845.2 → XP_024843613.1  coiled-coil domain-containing protein 120 isoform X2

      Conserved Domains (1) summary
      pfam11819
      Location:2 → 139
      DUF3338; Domain of unknown function (DUF3338)

    3. XM_024987842.2 → XP_024843610.1  coiled-coil domain-containing protein 120 isoform X2

      Conserved Domains (1) summary
      pfam11819
      Location:2 → 139
      DUF3338; Domain of unknown function (DUF3338)

    4. XM_024987846.2 → XP_024843614.1  coiled-coil domain-containing protein 120 isoform X2

      Conserved Domains (1) summary
      pfam11819
      Location:2 → 139
      DUF3338; Domain of unknown function (DUF3338)

    5. XM_024987840.2 → XP_024843608.1  coiled-coil domain-containing protein 120 isoform X1

      Conserved Domains (1) summary
      pfam11819
      Location:79 → 216
      DUF3338; Domain of unknown function (DUF3338)

    6. XM_010821891.4 → XP_010820193.1  coiled-coil domain-containing protein 120 isoform X3

      UniProtKB/TrEMBL
      G3MZL0
      Related
      ENSBTAP00000055010.3, ENSBTAT00000065422.3
      Conserved Domains (1) summary
      pfam11819
      Location:40 → 173
      DUF3338; Domain of unknown function (DUF3338)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials