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    FIBP FGF1 intracellular binding protein [ Bos taurus (domestic cattle) ]

    Gene ID: 510968, updated on 27-Dec-2024

    Summary

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    Official Symbol
    FIBPprovided by VGNC
    Official Full Name
    FGF1 intracellular binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:29006
    See related
    BGD:BT11702; Ensembl:ENSBTAG00000020775
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FIBP in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (43993544..44005226, complement)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene MUS81 structure-specific endonuclease subunit Neighboring gene EGF containing fibulin extracellular matrix protein 2 Neighboring gene cathepsin W Neighboring gene coiled-coil domain containing 85B Neighboring gene FOS like 1, AP-1 transcription factor subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Differential expression of signal transduction factors in ovarian follicle development: a functional role for betaglycan and FIBP in granulosa cells in cattle. Forde N, et al. Physiol Genomics, 2008 Apr 22. PMID 18285519
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Inhibition of genes for betaglycan and FIBP in granulosa cells in vitro suggests that they inhibit estradiol production in regressing subordinate follicles.
      Title: Differential expression of signal transduction factors in ovarian follicle development: a functional role for betaglycan and FIBP in granulosa cells in cattle.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC134195

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fibroblast growth factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in platelet aggregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acidic fibroblast growth factor intracellular-binding protein
    Names
    fibroblast growth factor (acidic) intracellular binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075482.2 → NP_001068950.1  acidic fibroblast growth factor intracellular-binding protein

      See identical proteins and their annotated locations for NP_001068950.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110265
      UniProtKB/TrEMBL
      A0AAA9T1Q9, Q2YDE0
      Related
      ENSBTAP00000091663.1, ENSBTAT00000125569.1
      Conserved Domains (1) summary
      pfam05427
      Location:3 → 356
      FIBP; Acidic fibroblast growth factor binding (FIBP)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      43993544..44005226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059882842.1 → XP_059738825.1  acidic fibroblast growth factor intracellular-binding protein isoform X2

      UniProtKB/TrEMBL
      A0AAA9T1Q9

    2. XM_059882844.1 → XP_059738827.1  acidic fibroblast growth factor intracellular-binding protein isoform X5

      UniProtKB/TrEMBL
      A0AAA9TVX8
      Related
      ENSBTAP00000102776.1, ENSBTAT00000099999.1

    3. XM_059882841.1 → XP_059738824.1  acidic fibroblast growth factor intracellular-binding protein isoform X1

      UniProtKB/TrEMBL
      A0AAA9TVX8

    4. XM_059882843.1 → XP_059738826.1  acidic fibroblast growth factor intracellular-binding protein isoform X4

      UniProtKB/TrEMBL
      A0AAA9TVX8

    5. XM_005227057.3 → XP_005227114.1  acidic fibroblast growth factor intracellular-binding protein isoform X3

      See identical proteins and their annotated locations for XP_005227114.1

      UniProtKB/TrEMBL
      A0AAA9T1Q9, F6RM59
      Related
      ENSBTAP00000027685.5, ENSBTAT00000027685.6
      Conserved Domains (1) summary
      pfam05427
      Location:3 → 363
      FIBP; Acidic fibroblast growth factor binding (FIBP)

    RNA

    1. XR_009493307.1 RNA Sequence

    2. XR_009493309.1 RNA Sequence

      Related
      ENSBTAT00000121168.1

    3. XR_009493308.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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