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    RPL3 ribosomal protein L3 [ Bos taurus (domestic cattle) ]

    Gene ID: 282688, updated on 29-Jan-2025

    Summary

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    Official Symbol
    RPL3provided by VGNC
    Official Full Name
    ribosomal protein L3provided by VGNC
    Primary source
    VGNC:VGNC:101451
    See related
    Ensembl:ENSBTAG00000003228
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RPL3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (110745807..110752067, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene platelet derived growth factor subunit B Neighboring gene uncharacterized LOC101906018 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene small nucleolar RNA U83B Neighboring gene small nucleolar RNA U82P Neighboring gene small nucleolar RNA SNORD43 Neighboring gene uncharacterized LOC132345358 Neighboring gene microRNA mir-2440 Neighboring gene synaptogyrin 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. cDNA sequence for bovine ribosomal protein L3 carrying a bipartite nuclear targeting motif, identified also in many other ribosomal proteins. Simonic T, et al. Biochim Biophys Acta, 1994 Nov 22. PMID 7948030
    2. The intron-containing L3 ribosomal protein gene (RPL3): sequence analysis and identification of U43 and of two novel intronic small nucleolar RNAs. Duga S, et al. Biochim Biophys Acta, 2000 Feb 29. PMID 10684968
    3. Characterization of gene expression profiles in early bovine pregnancy using a custom cDNA microarray. Ishiwata H, et al. Mol Reprod Dev, 2003 May. PMID 12658628
    4. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    5. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein uL3
    Names
    60S ribosomal protein L3
    NP_777140.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174715.1 → NP_777140.1  large ribosomal subunit protein uL3

      See identical proteins and their annotated locations for NP_777140.1

      Status: PROVISIONAL

      Source sequence(s)
      Z29555
      UniProtKB/Swiss-Prot
      P39872, Q5E9A8, Q9N0L7
      UniProtKB/TrEMBL
      B1H0W8
      Related
      ENSBTAP00070038476.1, ENSBTAT00070064056.1
      Conserved Domains (1) summary
      PTZ00103
      Location:1 → 400
      PTZ00103; 60S ribosomal protein L3; Provisional

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      110745807..110752067 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P39872.2 GenPept UniProtKB/Swiss-Prot:P39872

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